RNAsamba is a tool for computing the coding potential of RNA sequences using a neural network classification model. It can be used to identify mRNAs and lncRNAs without relying on database searches.
RNAsamba is available as a package for local installation. It provides a command-line which includes a command for training new models and additional options for classification. Check our documentation for details on how to install and use RNAsamba.
"RNAsamba: neural network-based assessment of the protein-coding potential of RNA sequences".
Camargo, A. P., Sourkov, V., Pereira, G. A. G. & Carazzolle, M. F. – NAR Genomics and Bioinformatics (2020).Go to article